Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13980 and 13981 are separated by 247 nucleotides13981 and 13982 are separated by 758 nucleotides13982 and 13983 are separated by 436 nucleotides13983 and 13984 are separated by 550 nucleotides mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510,647 to 512,391 13980 mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512,639 to 514,652 13981 mRNA_5614: 13982 - BLAST Zinc finger protein DZIP1L [Rhizoctonia solani], at 515,411 to 519,507 13982 mRNA_5615: 13983 - HMMPfam-GRF zinc finger-PF06839, at 519,944 to 520,866 13983 mRNA_5616: 13984 - HMMPfam-GRF zinc finger-PF06839, at 521,417 to 522,202 13984
Group Condition mRNA_5612 mRNA_5613 mRNA_5614 mRNA_5615 mRNA_5616
13980 13981 13982 13983 13984
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.3 +0.6 -2.1
growth on oleic acid YNB Glucose -0.2 N.D. -0.2 -0.1 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.1 -0.5 -1.2
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.1 -0.3 -1.0
growth on ricinoleic acid YNB Glucose +0.3 N.D. +0.2 -0.2 -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 N.D. -0.3 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.3 -0.6 -0.9
growth on ypd YPD -0.5 N.D. +0.1 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. -0.2 -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.0 +1.0 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.0 +0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.7 N.D. +0.4 +0.3 -1.4
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. -0.2 +0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.5 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.2 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.6 +0.0 +0.3
auxotrophy YNB Glucose +0.2 N.D. -0.4 +0.0 +0.9
auxotrophy Dropout Complete +0.1 N.D. -0.3 -0.0 +1.1
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. -0.1 -0.3 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.5 -0.2 +0.8
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.1 -0.1 +1.8
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