Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13989 and 13990 are separated by 155 nucleotides13990 and 13991 are separated by 217 nucleotides13991 and 13992 are separated by 616 nucleotides13992 and 13993 are separated by 774 nucleotides mRNA_5621: 13989 - Hypothetical Protein, at 530,337 to 531,503 13989 mRNA_5622: 13990 - K00849 galK galactokinase, at 531,659 to 534,063 13990 mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534,281 to 535,136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535,753 to 536,555 13992 mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537,330 to 538,157 13993
Group Condition mRNA_5621 mRNA_5622 mRNA_5623 mRNA_5624 mRNA_5625
13989 13990 13991 13992 13993
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 +0.0 -0.0 -3.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.1 +0.2 -1.9 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.2 -1.3 -1.5 -0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.3 -2.3 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.4 +0.6 -2.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.1 -0.8 +0.8 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.1 +0.2 -0.3 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 -0.6 +0.8 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 -0.7 +0.7 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 -0.2 +0.9 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.0 +0.0 +0.8 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 +0.0 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.1 +0.6 +0.3
growth on ypd YPD +0.1 -0.2 +0.3 +0.5 +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.1 +0.2 +0.4 -0.1
growth on oleic acid YNB Glucose +0.6 +0.1 +0.1 +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.2 -0.3 +1.5 +0.2
auxotrophy Dropout Complete -0.3 +0.1 -0.3 +1.5 +0.6
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.3 +0.1 +1.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.1 -0.1 +1.8 -0.4
auxotrophy YNB Glucose -0.1 +0.3 -0.3 +1.8 +0.6
remove
mRNA_5621
plot
remove
mRNA_5622
plot
remove
mRNA_5623
remove
mRNA_5624
plot
remove
mRNA_5625
plot