Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13993 and 13994 are separated by 647 nucleotides13994 and 13995 are separated by 94 nucleotides13995 and 13996 are separated by 162 nucleotides13996 and 13997 are separated by 368 nucleotides mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537,330 to 538,157 13993 mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538,805 to 539,634 13994 mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539,729 to 541,360 13995 mRNA_5628: 13996 - SUPERFAMILY--SSF57997, at 541,523 to 547,167 13996 mRNA_5629: 13997 - K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase, at 547,536 to 549,644 13997
Group Condition mRNA_5625 mRNA_5626 mRNA_5627 mRNA_5628 mRNA_5629
13993 13994 13995 13996 13997
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.2 N.D. +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.6 N.D. +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 N.D. +0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.3 N.D. -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 N.D. +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.5 N.D. +0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.0 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.2 N.D. -0.0 -0.1
growth on ypd YPD +0.2 -0.0 N.D. +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 N.D. -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 N.D. +0.2 +0.2
auxotrophy Dropout Complete +0.6 +0.2 N.D. -0.0 -0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.2 N.D. -0.1 +0.1
growth on oleic acid YNB Glucose +0.2 +0.3 N.D. +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.6 N.D. +0.2 -0.0
auxotrophy YNB Glucose +0.6 +0.1 N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +1.2 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +1.0 N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +1.2 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +1.2 N.D. +0.1 +0.3
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