Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13995 and 13996 are separated by 162 nucleotides13996 and 13997 are separated by 368 nucleotides13997 and 13998 are separated by 207 nucleotides13998 and 13999 are separated by 428 nucleotides mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539,729 to 541,360 13995 mRNA_5628: 13996 - SUPERFAMILY--SSF57997, at 541,523 to 547,167 13996 mRNA_5629: 13997 - K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase, at 547,536 to 549,644 13997 mRNA_5630: 13998 - HMMPfam-SUR7/PalI family-PF06687, at 549,852 to 551,893 13998 mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552,322 to 556,680 13999
Group Condition mRNA_5627 mRNA_5628 mRNA_5629 mRNA_5630 mRNA_5631
13995 13996 13997 13998 13999
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 -0.1 -0.6 -0.1
auxotrophy Dropout Complete N.D. -0.0 -0.2 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.4 -0.5 +0.2
auxotrophy YNB Glucose N.D. +0.0 -0.1 -0.7 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.4 +0.3 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.1 -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.1 -0.1 -0.0
growth on oleic acid YNB Glucose N.D. +0.1 -0.1 -0.1 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.1 -0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.3 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 +0.4 -0.1
growth on ypd YPD N.D. +0.1 -0.2 +0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 -0.0 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.3 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.3 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.2 +0.5 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.0 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.2 +0.2 +0.2
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