Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13999 and 14000 are separated by 388 nucleotides14000 and 14001 are separated by 642 nucleotides14001 and 14002 are separated by 322 nucleotides14002 and 14003 are separated by 595 nucleotides mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552,322 to 556,680 13999 mRNA_5632: 14000 - Hypothetical Protein, at 557,069 to 557,641 14000 mRNA_5633: 14001 - K01679 E4.2.1.2B, fumC fumarate hydratase, class II, at 558,284 to 560,290 14001 mRNA_5634: 14002 - K00750 GYG1, GYG2 glycogenin, at 560,613 to 563,450 14002 mRNA_5635: 14003 - HMMPfam-Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-PF15159, at 564,046 to 564,667 14003
Group Condition mRNA_5631 mRNA_5632 mRNA_5633 mRNA_5634 mRNA_5635
13999 14000 14001 14002 14003
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 N.D. -1.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.4 N.D. -1.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.0 N.D. -0.8 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 N.D. -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 N.D. -1.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 N.D. -0.2 N.D.
auxotrophy Dropout Complete -0.1 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.5 N.D. -0.2 N.D.
growth on ypd YPD +0.1 +0.1 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Glucose +0.1 -0.0 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.4 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 N.D. +0.1 N.D.
auxotrophy YNB Glucose +0.2 +0.2 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.5 N.D. +0.3 N.D.
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