Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14000 and 14001 are separated by 642 nucleotides14001 and 14002 are separated by 322 nucleotides14002 and 14003 are separated by 595 nucleotides14003 and 14004 are separated by 273 nucleotides mRNA_5632: 14000 - Hypothetical Protein, at 557,069 to 557,641 14000 mRNA_5633: 14001 - K01679 E4.2.1.2B, fumC fumarate hydratase, class II, at 558,284 to 560,290 14001 mRNA_5634: 14002 - K00750 GYG1, GYG2 glycogenin, at 560,613 to 563,450 14002 mRNA_5635: 14003 - HMMPfam-Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-PF15159, at 564,046 to 564,667 14003 mRNA_5636: 14004 - BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus], at 564,941 to 566,584 14004
Group Condition mRNA_5632 mRNA_5633 mRNA_5634 mRNA_5635 mRNA_5636
14000 14001 14002 14003 14004
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -1.3 N.D. -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -1.0 N.D. -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -1.3 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.2 N.D. -0.5
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.8 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.3 N.D. -0.9
growth on ypd YPD +0.1 N.D. -0.3 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.5 N.D. +0.1
auxotrophy Dropout Complete -0.2 N.D. +0.1 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -0.1 N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. -0.2 N.D. -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. -0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.0 N.D. -0.2
auxotrophy YNB Glucose +0.2 N.D. +0.2 N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. +0.1 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.2 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.1 N.D. -0.3
growth on oleic acid YNB Glucose -0.0 N.D. +0.3 N.D. +0.0
growth on ricinoleic acid YNB Glucose +0.5 N.D. +0.3 N.D. -0.2
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