Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14002 and 14003 are separated by 595 nucleotides14003 and 14004 are separated by 273 nucleotides14004 and 14005 are separated by 290 nucleotides14005 and 14006 are separated by 298 nucleotides mRNA_5634: 14002 - K00750 GYG1, GYG2 glycogenin, at 560,613 to 563,450 14002 mRNA_5635: 14003 - HMMPfam-Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-PF15159, at 564,046 to 564,667 14003 mRNA_5636: 14004 - BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus], at 564,941 to 566,584 14004 mRNA_5637: 14005 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 566,875 to 570,624 14005 mRNA_5638: 14006 - Hypothetical Protein, at 570,923 to 572,239 14006
Group Condition mRNA_5634 mRNA_5635 mRNA_5636 mRNA_5637 mRNA_5638
14002 14003 14004 14005 14006
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 N.D. -0.9 -0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 N.D. -1.0 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -1.3 N.D. -0.3 -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.9 +0.0 -0.2
growth on ypd YPD -0.3 N.D. -0.4 -0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.8 N.D. +0.0 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.5 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -0.6 -0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.1 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.5 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.6 +0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.1 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. -0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.2 -0.3 +0.2
auxotrophy Dropout Complete +0.1 N.D. -0.3 +0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.3 +0.2 -0.1
auxotrophy YNB Glucose +0.2 N.D. -0.5 +0.4 -0.1
growth on ricinoleic acid YNB Glucose +0.3 N.D. -0.2 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. -0.0 -0.0 +0.1
growth on oleic acid YNB Glucose +0.3 N.D. +0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.3 +0.2 +0.2
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