Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14008 and 14009 are separated by 161 nucleotides14009 and 14010 are separated by 304 nucleotides14010 and 14011 are separated by 306 nucleotides14011 and 14012 are separated by 2863 nucleotides mRNA_5640: 14008 - BLAST putative acyl- dehydrogenase [Moniliophthora rore..., at 574,642 to 575,900 14008 mRNA_5641: 14009 - K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17, at 576,062 to 577,225 14009 mRNA_5642: 14010 - Interpro Mitochondrial inner-membrane-bound regulator, at 577,530 to 579,606 14010 mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579,913 to 580,872 14011 mRNA_5644: 14012 - Hypothetical Protein, at 583,736 to 584,443 14012
Group Condition mRNA_5640 mRNA_5641 mRNA_5642 mRNA_5643 mRNA_5644
14008 14009 14010 14011 14012
auxotrophy YNB Glucose -0.3 N.D. -0.7 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -1.7 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 N.D. -0.4 +0.1 +0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -1.1 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 N.D. -0.4 +0.3 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. -0.1 +0.3 -0.8
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.6 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. -0.7 +0.3 -0.3
auxotrophy Dropout Complete +0.0 N.D. -0.4 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.3 +0.5 -0.7
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.1 +0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. +0.8 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.1 +0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.9 +0.4 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.5 +0.9 +0.1
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.6 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. +0.8 +0.2 -0.0
growth on ypd YPD -0.6 N.D. +1.9 +0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.2 +0.5 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. +0.7 +0.1 +1.0
growth on oleic acid YNB Glucose +0.3 N.D. +1.8 +0.2 -0.1
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