Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14011 and 14012 are separated by 2863 nucleotides14012 and 14013 are separated by 269 nucleotides14013 and 14014 are separated by 210 nucleotides14014 and 14015 are separated by 514 nucleotides mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579,913 to 580,872 14011 mRNA_5644: 14012 - Hypothetical Protein, at 583,736 to 584,443 14012 mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584,713 to 586,254 14013 mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586,465 to 587,964 14014 mRNA_5647: 14015 - KOG4719 Nuclear pore complex protein, at 588,479 to 592,654 14015
Group Condition mRNA_5643 mRNA_5644 mRNA_5645 mRNA_5646 mRNA_5647
14011 14012 14013 14014 14015
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.7 -0.1 -0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.8 -0.0 -0.7 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.8 -0.2 -0.3 +0.2
growth on ypd YPD +0.0 -0.6 -0.1 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.7 -0.2 +0.1 -0.3
auxotrophy YNB Glucose +0.1 -0.2 -0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.8 -0.2 -0.1 +0.0
auxotrophy Dropout Complete +0.0 +0.1 -0.4 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.3 -0.2 -0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.1 -0.0 -0.6 -0.2
growth on oleic acid YNB Glucose +0.2 -0.1 -0.2 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.2 -0.3 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.3 +0.0 +0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 -0.1 -0.0 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 -0.1 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.4 -0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 +0.1 -0.2 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.9 -0.2 +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +1.0 -0.0 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.0 +0.1 +0.1 +0.8
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