Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14012 and 14013 are separated by 269 nucleotides14013 and 14014 are separated by 210 nucleotides14014 and 14015 are separated by 514 nucleotides14015 and 14016 are separated by 186 nucleotides mRNA_5644: 14012 - Hypothetical Protein, at 583,736 to 584,443 14012 mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584,713 to 586,254 14013 mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586,465 to 587,964 14014 mRNA_5647: 14015 - KOG4719 Nuclear pore complex protein, at 588,479 to 592,654 14015 mRNA_5648: 14016 - K11268 ESCO, ECO1 N-acetyltransferase, at 592,841 to 594,405 14016
Group Condition mRNA_5644 mRNA_5645 mRNA_5646 mRNA_5647 mRNA_5648
14012 14013 14014 14015 14016
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 -0.9 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.0 -0.7 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.8 -0.2 -0.3 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.7 -0.2 +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.2 -0.1 +0.0 N.D.
growth on ypd YPD -0.6 -0.1 -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.6 -0.2 N.D.
auxotrophy YNB Glucose -0.2 -0.3 -0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 -0.1 -0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.4 -0.3 -0.3 N.D.
growth on oleic acid YNB Glucose -0.1 -0.2 -0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.0 +0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.2 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 +0.0 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.0 +0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 -0.2 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.0 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.1 +0.8 N.D.
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