Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14013 and 14014 are separated by 210 nucleotides
14014 and 14015 are separated by 514 nucleotides
14015 and 14016 are separated by 186 nucleotides
14016 and 14017 are separated by 688 nucleotides
mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584,713 to 586,254
14013
mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586,465 to 587,964
14014
mRNA_5647: 14015 - KOG4719 Nuclear pore complex protein, at 588,479 to 592,654
14015
mRNA_5648: 14016 - K11268 ESCO, ECO1 N-acetyltransferase, at 592,841 to 594,405
14016
mRNA_5649: 14017 - SUPERFAMILY--SSF52047, at 595,094 to 596,616
14017
Group
Condition
mRNA
_5645
mRNA
_5646
mRNA
_5647
mRNA
_5648
mRNA
_5649
14013
14014
14015
14016
14017
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.9
-0.2
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.7
-0.2
N.D.
-0.4
growth on ricinoleic acid
YNB Glucose
-0.0
-0.6
-0.2
N.D.
-0.2
growth on ypd
YPD
-0.1
-0.3
-0.1
N.D.
-0.4
auxotrophy
Dropout Complete
-0.4
-0.3
-0.3
N.D.
+0.3
auxotrophy
YNB Glucose
-0.3
-0.2
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.3
N.D.
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.3
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
+0.0
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
+0.1
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.1
-0.1
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
+0.2
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
-0.0
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.2
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
-0.3
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.3
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
-0.2
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.1
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
+0.5
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.0
+0.0
N.D.
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
+0.8
N.D.
+0.1
remove
mRNA_5645
plot
remove
mRNA_5646
plot
remove
mRNA_5647
remove
mRNA_5648
plot
remove
mRNA_5649
plot