Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14018 and 14019 are separated by 253 nucleotides14019 and 14020 are separated by 2169 nucleotides14020 and 14021 are separated by 921 nucleotides14021 and 14022 are separated by 599 nucleotides mRNA_5650: 14018 - Hypothetical Protein, at 597,091 to 598,437 14018 mRNA_5651: 14019 - K13728 MAD2L2 mitotic spindle assembly checkpoint protein MAD2B, at 598,691 to 599,963 14019 mRNA_5652: 14020 - KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development, at 602,133 to 602,528 14020 mRNA_5653: 14021 - Hypothetical Protein, at 603,450 to 604,586 14021 mRNA_5654: 14022 - K01637 E4.1.3.1, aceA isocitrate lyase, at 605,186 to 607,588 14022
Group Condition mRNA_5650 mRNA_5651 mRNA_5652 mRNA_5653 mRNA_5654
14018 14019 14020 14021 14022
growth on oleic acid YNB Oleic Acid +0.4 +0.1 -1.0 -0.0 -3.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +1.2 +1.1 -0.5 -4.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.3 +1.7 -0.9 -4.3
auxotrophy YNB Glucose -0.8 +0.1 -0.8 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 -1.0 -0.7 +0.0
auxotrophy Dropout Complete -0.8 +0.0 -0.5 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 -0.9 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -1.0 +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 -0.7 +0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.6 +0.6 +0.6 +0.1
growth on oleic acid YNB Glucose -0.1 +0.3 -0.1 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 -0.5 +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 -0.5 +0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 -0.2 +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.7 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 +0.9 +0.5 -0.5
growth on ypd YPD +0.2 +0.7 +0.3 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +1.5 +0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.1 +1.6 +1.2 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 +0.2 +2.7 +0.5 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 +3.2 +1.4 +0.1
remove
mRNA_5650
plot
remove
mRNA_5651
plot
remove
mRNA_5652
remove
mRNA_5653
plot
remove
mRNA_5654
plot