Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14019 and 14020 are separated by 2169 nucleotides
14020 and 14021 are separated by 921 nucleotides
14021 and 14022 are separated by 599 nucleotides
14022 and 14023 are separated by 216 nucleotides
mRNA_5651: 14019 - K13728 MAD2L2 mitotic spindle assembly checkpoint protein MAD2B, at 598,691 to 599,963
14019
mRNA_5652: 14020 - KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development, at 602,133 to 602,528
14020
mRNA_5653: 14021 - Hypothetical Protein, at 603,450 to 604,586
14021
mRNA_5654: 14022 - K01637 E4.1.3.1, aceA isocitrate lyase, at 605,186 to 607,588
14022
mRNA_5655: 14023 - K01115 PLD1_2 phospholipase D1/2, at 607,805 to 615,263
14023
Group
Condition
mRNA
_5651
mRNA
_5652
mRNA
_5653
mRNA
_5654
mRNA
_5655
14019
14020
14021
14022
14023
growth on oleic acid
YNB Oleic Acid
+0.1
-1.0
-0.0
-3.5
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+1.7
-0.9
-4.3
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.2
+1.1
-0.5
-4.6
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-1.0
-0.7
+0.0
-0.5
auxotrophy
YNB Glucose
+0.1
-0.8
-0.5
-0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.0
+0.1
+0.1
-0.9
auxotrophy
Dropout Complete
+0.0
-0.5
-0.4
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.9
-0.1
+0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.7
+0.5
-0.1
+0.2
growth on oleic acid
YNB Glucose
+0.3
-0.1
+0.0
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.5
+0.4
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.5
+0.3
+0.0
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.7
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
+0.4
+0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.6
+0.6
+0.1
+0.1
growth on ypd
YPD
+0.7
+0.3
-0.2
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.9
+0.5
-0.5
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+1.5
+0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
+1.6
+1.2
-0.5
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+2.7
+0.5
-0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+3.2
+1.4
+0.1
+0.2
remove
mRNA_5651
plot
remove
mRNA_5652
plot
remove
mRNA_5653
remove
mRNA_5654
plot
remove
mRNA_5655
plot