Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14021 and 14022 are separated by 599 nucleotides14022 and 14023 are separated by 216 nucleotides14023 and 14024 are separated by 667 nucleotides14024 and 14025 are separated by 168 nucleotides mRNA_5653: 14021 - Hypothetical Protein, at 603,450 to 604,586 14021 mRNA_5654: 14022 - K01637 E4.1.3.1, aceA isocitrate lyase, at 605,186 to 607,588 14022 mRNA_5655: 14023 - K01115 PLD1_2 phospholipase D1/2, at 607,805 to 615,263 14023 mRNA_5656: 14024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 615,931 to 617,472 14024 mRNA_5657: 14025 - SUPERFAMILY--SSF52047, at 617,641 to 619,056 14025
Group Condition mRNA_5653 mRNA_5654 mRNA_5655 mRNA_5656 mRNA_5657
14021 14022 14023 14024 14025
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -4.3 -0.7 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -4.6 -0.4 N.D. +0.3
growth on oleic acid YNB Oleic Acid -0.0 -3.5 -0.4 N.D. -0.0
auxotrophy YNB Glucose -0.5 -0.1 -0.4 N.D. -0.0
auxotrophy Dropout Complete -0.4 -0.2 -0.4 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.0 -0.5 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 -0.9 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.5 -0.3 -0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 -0.1 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.5 +0.2 N.D. -0.4
growth on oleic acid YNB Glucose +0.0 -0.1 -0.3 N.D. +0.1
growth on ypd YPD -0.2 +0.0 +0.1 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -0.2 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.1 +0.2 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.5 +0.2 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 -0.0 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.1 +0.1 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.1 N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.0 +0.4 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.4 +0.1 +0.2 N.D. -0.2
remove
mRNA_5653
plot
remove
mRNA_5654
plot
remove
mRNA_5655
remove
mRNA_5656
plot
remove
mRNA_5657
plot