Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14022 and 14023 are separated by 216 nucleotides14023 and 14024 are separated by 667 nucleotides14024 and 14025 are separated by 168 nucleotides14025 and 14026 are separated by 180 nucleotides mRNA_5654: 14022 - K01637 E4.1.3.1, aceA isocitrate lyase, at 605,186 to 607,588 14022 mRNA_5655: 14023 - K01115 PLD1_2 phospholipase D1/2, at 607,805 to 615,263 14023 mRNA_5656: 14024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 615,931 to 617,472 14024 mRNA_5657: 14025 - SUPERFAMILY--SSF52047, at 617,641 to 619,056 14025 mRNA_5658: 14026 - SUPERFAMILY--SSF52047, at 619,237 to 620,685 14026
Group Condition mRNA_5654 mRNA_5655 mRNA_5656 mRNA_5657 mRNA_5658
14022 14023 14024 14025 14026
growth on ricinoleic acid YNB Methylricinoleic Acid -4.6 -0.4 N.D. +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -4.3 -0.7 N.D. +0.4 +0.2
growth on oleic acid YNB Oleic Acid -3.5 -0.4 N.D. -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 N.D. -0.7 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 N.D. -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.9 N.D. -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 N.D. -0.4 -0.0
auxotrophy Dropout Complete -0.2 -0.4 N.D. -0.0 +0.1
auxotrophy YNB Glucose -0.1 -0.4 N.D. -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.2 N.D. -0.3 +0.2
growth on oleic acid YNB Glucose -0.1 -0.3 N.D. +0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.3 -0.4 N.D. +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 N.D. -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 N.D. +0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 N.D. -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.5 N.D. +0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. +0.0 +0.1
growth on ypd YPD +0.0 +0.1 N.D. -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 N.D. +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.4 N.D. +0.3 +0.1
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