Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14023 and 14024 are separated by 667 nucleotides14024 and 14025 are separated by 168 nucleotides14025 and 14026 are separated by 180 nucleotides14026 and 14027 are separated by 111 nucleotides mRNA_5655: 14023 - K01115 PLD1_2 phospholipase D1/2, at 607,805 to 615,263 14023 mRNA_5656: 14024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 615,931 to 617,472 14024 mRNA_5657: 14025 - SUPERFAMILY--SSF52047, at 617,641 to 619,056 14025 mRNA_5658: 14026 - SUPERFAMILY--SSF52047, at 619,237 to 620,685 14026 mRNA_5659: 14027 - KOG2422 Uncharacterized conserved protein, at 620,797 to 623,499 14027
Group Condition mRNA_5655 mRNA_5656 mRNA_5657 mRNA_5658 mRNA_5659
14023 14024 14025 14026 14027
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. -0.2 +0.1 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.7 -0.9 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.0 +0.3 -1.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.0 +0.1 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.3 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. -0.3 +0.2 -0.6
auxotrophy YNB Glucose -0.4 N.D. -0.0 +0.3 -0.3
auxotrophy Dropout Complete -0.4 N.D. -0.0 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.4 -0.0 -0.0
growth on oleic acid YNB Glucose -0.3 N.D. +0.1 +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 N.D. +0.4 +0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.1 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.2 -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.4 +0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.0 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +0.3 +0.0 +0.2
growth on ypd YPD +0.1 N.D. -0.1 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. +0.1 +0.5 +0.1
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.4 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. +0.3 +0.1 +0.2
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