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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14024 and 14025 are separated by 168 nucleotides
14025 and 14026 are separated by 180 nucleotides
14026 and 14027 are separated by 111 nucleotides
14027 and 14028 are separated by 146 nucleotides
mRNA_5656: 14024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 615,931 to 617,472
14024
mRNA_5657: 14025 - SUPERFAMILY--SSF52047, at 617,641 to 619,056
14025
mRNA_5658: 14026 - SUPERFAMILY--SSF52047, at 619,237 to 620,685
14026
mRNA_5659: 14027 - KOG2422 Uncharacterized conserved protein, at 620,797 to 623,499
14027
mRNA_5660: 14028 - Hypothetical Protein, at 623,646 to 625,624
14028
Group
Condition
mRNA
_5656
mRNA
_5657
mRNA
_5658
mRNA
_5659
mRNA
_5660
14024
14025
14026
14027
14028
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
+0.1
-1.3
-2.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
-0.9
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
+0.2
-0.6
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
+0.3
-1.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
+0.1
-0.9
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.0
+0.0
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
+0.1
+0.2
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.4
-0.0
-0.0
-0.1
auxotrophy
YNB Glucose
N.D.
-0.0
+0.3
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.5
-0.2
-0.3
growth on oleic acid
YNB Glucose
N.D.
+0.1
+0.0
-0.1
-0.1
auxotrophy
Dropout Complete
N.D.
-0.0
+0.1
-0.0
-0.0
growth on ypd
YPD
N.D.
-0.1
+0.3
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
+0.0
+0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
+0.1
-0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
+0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.5
+0.1
-0.4
growth on ricinoleic acid
YNB Glucose
N.D.
+0.4
+0.1
+0.3
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.4
+0.2
-0.2
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
+0.1
+0.2
+0.8
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