Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14031 and 14032 are separated by 112 nucleotides
14032 and 14033 are separated by 1489 nucleotides
14033 and 14034 are separated by 386 nucleotides
14034 and 14035 are separated by 4208 nucleotides
mRNA_5663: 14031 - K15441 TAD2, ADAT2 tRNA-specific adenosine deaminase 2, at 629,473 to 630,402
14031
mRNA_5664: 14032 - K01262 pepP Xaa-Pro aminopeptidase, at 630,515 to 632,715
14032
mRNA_5665: 14033 - K15083 RAD16 DNA repair protein RAD16, at 634,205 to 636,873
14033
mRNA_5666: 14034 - Hypothetical Protein, at 637,260 to 638,584
14034
mRNA_5667: 14035 - K11233 SSK1 osomolarity two-component system, response regulator SSK1, at 642,793 to 648,199
14035
Group
Condition
mRNA
_5663
mRNA
_5664
mRNA
_5665
mRNA
_5666
mRNA
_5667
14031
14032
14033
14034
14035
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.0
-0.1
-0.2
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-1.4
+0.1
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.3
+0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.6
-0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.2
+0.2
-0.3
auxotrophy
Dropout Complete
N.D.
+0.7
+0.0
-0.1
-1.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
-0.2
+0.0
-0.6
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
-0.2
+0.1
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.1
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
-0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
-0.2
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
+0.1
+0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.0
+0.1
-0.6
auxotrophy
YNB Glucose
N.D.
+0.4
-0.2
+0.3
-0.7
growth on ypd
YPD
N.D.
-0.1
-0.3
+0.2
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.1
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.2
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.5
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
-0.5
-0.4
+1.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.5
+0.1
-0.3
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.7
+0.0
-0.1
+0.3
remove
mRNA_5663
plot
remove
mRNA_5664
plot
remove
mRNA_5665
remove
mRNA_5666
plot
remove
mRNA_5667
plot