Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14031 and 14032 are separated by 112 nucleotides14032 and 14033 are separated by 1489 nucleotides14033 and 14034 are separated by 386 nucleotides14034 and 14035 are separated by 4208 nucleotides mRNA_5663: 14031 - K15441 TAD2, ADAT2 tRNA-specific adenosine deaminase 2, at 629,473 to 630,402 14031 mRNA_5664: 14032 - K01262 pepP Xaa-Pro aminopeptidase, at 630,515 to 632,715 14032 mRNA_5665: 14033 - K15083 RAD16 DNA repair protein RAD16, at 634,205 to 636,873 14033 mRNA_5666: 14034 - Hypothetical Protein, at 637,260 to 638,584 14034 mRNA_5667: 14035 - K11233 SSK1 osomolarity two-component system, response regulator SSK1, at 642,793 to 648,199 14035
Group Condition mRNA_5663 mRNA_5664 mRNA_5665 mRNA_5666 mRNA_5667
14031 14032 14033 14034 14035
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.0 -0.1 -0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.4 +0.1 +0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.3 +0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.6 -0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.2 +0.2 -0.3
auxotrophy Dropout Complete N.D. +0.7 +0.0 -0.1 -1.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.2 +0.0 -0.6
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.2 +0.1 -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.1 -0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.1 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 -0.2 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 +0.1 +0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.0 +0.1 -0.6
auxotrophy YNB Glucose N.D. +0.4 -0.2 +0.3 -0.7
growth on ypd YPD N.D. -0.1 -0.3 +0.2 +0.2
growth on oleic acid YNB Glucose N.D. +0.1 -0.1 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 -0.0 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.5 -0.4 +1.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.5 +0.1 -0.3 +0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 +0.0 -0.1 +0.3
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