Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14036 and 14037 are separated by 360 nucleotides14037 and 14038 are separated by 396 nucleotides14038 and 14039 are separated by 853 nucleotides14039 and 14040 are separated by 163 nucleotides mRNA_5668: 14036 - K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, at 648,393 to 650,754 14036 mRNA_5669: 14037 - K01736 aroC chorismate synthase, at 651,115 to 652,658 14037 mRNA_5670: 14038 - K18995 DHX29 ATP-dependent RNA helicase DHX29, at 653,055 to 658,546 14038 mRNA_5671: 14039 - K11675 IES1 Ino eighty subunit 1, at 659,400 to 661,417 14039 mRNA_5672: 14040 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 661,581 to 662,502 14040
Group Condition mRNA_5668 mRNA_5669 mRNA_5670 mRNA_5671 mRNA_5672
14036 14037 14038 14039 14040
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. +0.1 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. -0.5 -0.2 N.D.
auxotrophy YNB Glucose -0.2 N.D. -0.0 -0.6 N.D.
auxotrophy Dropout Complete -0.1 N.D. +0.1 -0.7 N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.1 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.2 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.4 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.2 +0.1 N.D.
growth on ypd YPD -0.0 N.D. -0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 +0.0 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. +0.0 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. +0.1 +1.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.3 +0.6 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.0 +0.9 N.D.
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