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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14041 and 14042 are separated by 690 nucleotides
14042 and 14043 are separated by 199 nucleotides
14043 and 14044 are separated by 43 nucleotides
14044 and 14045 are separated by 149 nucleotides
mRNA_5673: 14041 - Hypothetical Protein, at 663,280 to 665,489
14041
mRNA_5674: 14042 - K14560 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3, at 666,180 to 667,115
14042
mRNA_5675: 14043 - Hypothetical Protein, at 667,315 to 670,414
14043
mRNA_5676: 14044 - BLAST putative protein 27 [Rhizopogon vesiculosus], at 670,458 to 672,345
14044
mRNA_5677: 14045 - K15901 CGI121, TPRKB EKC/KEOPS complex subunit CGI121/TPRKB, at 672,495 to 673,304
14045
Group
Condition
mRNA
_5673
mRNA
_5674
mRNA
_5675
mRNA
_5676
mRNA
_5677
14041
14042
14043
14044
14045
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
+0.3
-1.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
+0.3
-0.5
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
+0.0
-0.5
+0.1
growth on oleic acid
YNB Glucose
-0.3
N.D.
-0.1
-0.1
-0.0
growth on ypd
YPD
+0.2
N.D.
-0.1
-0.4
-0.0
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
+0.4
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
-0.1
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
-0.1
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
+0.1
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
+0.3
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.2
+0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
+0.0
+0.1
-0.0
auxotrophy
YNB Glucose
+0.0
N.D.
+0.2
+0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
+0.3
+0.2
-0.3
auxotrophy
Dropout Complete
-0.1
N.D.
+0.3
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
+0.2
+0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.4
+0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
-0.1
+0.7
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
+0.3
+0.6
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
N.D.
-0.1
+0.7
-0.0
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