Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14052 and 14053 are separated by 108 nucleotides14053 and 14054 are separated by 139 nucleotides14054 and 14055 are separated by 340 nucleotides14055 and 14056 are separated by 269 nucleotides mRNA_5684: 14052 - K07404 pgl 6-phosphogluconolactonase, at 687,998 to 689,292 14052 mRNA_5685: 14053 - HMMPfam-Complex 1 protein (LYR family)-PF05347, at 689,401 to 690,702 14053 mRNA_5686: 14054 - K05294 PGAP1 glycosylphosphatidylinositol deacylase, at 690,842 to 694,591 14054 mRNA_5687: 14055 - K08764 SCP2, SCPX sterol carrier protein 2, at 694,932 to 696,791 14055 mRNA_5688: 14056 - K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1, at 697,061 to 698,504 14056
Group Condition mRNA_5684 mRNA_5685 mRNA_5686 mRNA_5687 mRNA_5688
14052 14053 14054 14055 14056
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -0.6 -1.1 -3.9
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.5 -0.3 -2.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.3 -0.5 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -1.2 -0.6 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.4 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.2 -0.4 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.1 -0.0 -0.9
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.3 -0.1 -0.7
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.0 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. +0.2 +0.1 -0.3
growth on ypd YPD -0.2 N.D. -0.2 -0.2 +0.7
auxotrophy Dropout Complete +0.1 N.D. +0.6 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -1.2 +0.0 +1.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.6 -0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 +0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.4 +0.1 +1.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.4 -0.1 +0.6
growth on oleic acid YNB Glucose +0.2 N.D. +0.7 -0.0 -0.2
auxotrophy YNB Glucose +0.2 N.D. +0.3 +0.3 +0.6
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.2 +0.2 +1.5
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