Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14059 and 14060 are separated by 113 nucleotides14060 and 14061 are separated by 343 nucleotides14061 and 14062 are separated by 244 nucleotides14062 and 14063 are separated by 624 nucleotides mRNA_5691: 14059 - K05956 RABGGTB geranylgeranyl transferase type-2 subunit beta, at 702,486 to 703,817 14059 mRNA_5692: 14060 - K07342 SEC61G, SSS1, secE protein transport protein SEC61 subunit gamma and related proteins, at 703,931 to 704,550 14060 mRNA_5693: 14061 - KOG4186 Peroxisomal biogenesis protein (peroxin), at 704,894 to 706,050 14061 mRNA_5694: 14062 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF13883,SUPERFAMILY--SSF50475, at 706,295 to 707,436 14062 mRNA_5695: 14063 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 708,061 to 710,208 14063
Group Condition mRNA_5691 mRNA_5692 mRNA_5693 mRNA_5694 mRNA_5695
14059 14060 14061 14062 14063
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -3.9 +0.2 -1.7
growth on oleic acid YNB Oleic Acid N.D. N.D. -3.7 -0.1 -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -2.7 +0.0 -1.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.5 -0.0 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.3 +0.1 -1.1
growth on ypd YPD N.D. N.D. -1.3 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.4 +0.4 -1.1
auxotrophy YNB Glucose N.D. N.D. -0.2 +0.2 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.3 -0.3 -0.5
growth on oleic acid YNB Glucose N.D. N.D. -0.3 -0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.2 +0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 +0.2 -0.7
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.6 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.1 -0.6
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 +0.4 -0.8
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.3 -0.2 +0.4
auxotrophy Dropout Complete N.D. N.D. -0.0 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.3 -0.1 -0.1
remove
mRNA_5691
plot
remove
mRNA_5692
plot
remove
mRNA_5693
remove
mRNA_5694
plot
remove
mRNA_5695
plot