Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14061 and 14062 are separated by 244 nucleotides14062 and 14063 are separated by 624 nucleotides14063 and 14064 are separated by 356 nucleotides14064 and 14065 are separated by 296 nucleotides mRNA_5693: 14061 - KOG4186 Peroxisomal biogenesis protein (peroxin), at 704,894 to 706,050 14061 mRNA_5694: 14062 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF13883,SUPERFAMILY--SSF50475, at 706,295 to 707,436 14062 mRNA_5695: 14063 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 708,061 to 710,208 14063 mRNA_5696: 14064 - K07152 SCO1_2 protein SCO1/2, at 710,565 to 711,827 14064 mRNA_5697: 14065 - K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1, at 712,124 to 713,421 14065
Group Condition mRNA_5693 mRNA_5694 mRNA_5695 mRNA_5696 mRNA_5697
14061 14062 14063 14064 14065
growth on ricinoleic acid YNB Ricinoleic Acid -3.9 +0.2 -1.7 N.D. N.D.
growth on oleic acid YNB Oleic Acid -3.7 -0.1 -1.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -2.7 +0.0 -1.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 -1.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 -1.1 N.D. N.D.
growth on ypd YPD -1.3 +0.0 +0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.4 -1.1 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.2 -1.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.3 -0.5 N.D. N.D.
growth on oleic acid YNB Glucose -0.3 -0.2 -0.6 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.2 +0.3 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.7 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.6 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.4 -0.8 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 +0.4 N.D. N.D.
auxotrophy Dropout Complete -0.0 +0.2 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.1 N.D. N.D.
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