Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14063 and 14064 are separated by 356 nucleotides14064 and 14065 are separated by 296 nucleotides14065 and 14066 are separated by 811 nucleotides14066 and 14067 are separated by 449 nucleotides mRNA_5695: 14063 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 708,061 to 710,208 14063 mRNA_5696: 14064 - K07152 SCO1_2 protein SCO1/2, at 710,565 to 711,827 14064 mRNA_5697: 14065 - K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1, at 712,124 to 713,421 14065 mRNA_5698: 14066 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 714,233 to 715,636 14066 mRNA_5699: 14067 - HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300, at 716,086 to 718,925 14067
Group Condition mRNA_5695 mRNA_5696 mRNA_5697 mRNA_5698 mRNA_5699
14063 14064 14065 14066 14067
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 N.D. N.D. -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.5 N.D. N.D. -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 N.D. N.D. -0.1 +0.0
growth on oleic acid YNB Oleic Acid -1.0 N.D. N.D. -0.3 -0.0
growth on ricinoleic acid YNB Glucose -0.8 N.D. N.D. -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.7 N.D. N.D. -0.6 +0.3
ypd buoyancy 40 hrs High Buoyancy -1.1 N.D. N.D. -0.2 +0.4
auxotrophy YNB Glucose -1.0 N.D. N.D. -0.3 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 N.D. N.D. +0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.6 N.D. N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. N.D. +0.0 -0.2
growth on oleic acid YNB Glucose -0.6 N.D. N.D. -0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. N.D. -0.4 +0.3
auxotrophy Dropout Complete -0.2 N.D. N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. N.D. +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. N.D. -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. +0.1 +0.1
growth on ypd YPD +0.1 N.D. N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. N.D. +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. N.D. +0.5 +0.1
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