Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14065 and 14066 are separated by 811 nucleotides14066 and 14067 are separated by 449 nucleotides14067 and 14068 are separated by 357 nucleotides14068 and 14069 are separated by 103 nucleotides mRNA_5697: 14065 - K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1, at 712,124 to 713,421 14065 mRNA_5698: 14066 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 714,233 to 715,636 14066 mRNA_5699: 14067 - HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300, at 716,086 to 718,925 14067 mRNA_5700: 14068 - KOG0143 Iron/ascorbate family oxidoreductases, at 719,283 to 720,938 14068 mRNA_5701: 14069 - K13120 FAM32A protein FAM32A, at 721,042 to 721,632 14069
Group Condition mRNA_5697 mRNA_5698 mRNA_5699 mRNA_5700 mRNA_5701
14065 14066 14067 14068 14069
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.0 -0.1 -1.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.1 +0.2 -1.6
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.0 +0.4 -1.6
auxotrophy YNB Glucose N.D. -0.3 +0.4 -0.0 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.1 +0.3 -1.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.6 +0.3 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 -0.1 -0.9
auxotrophy Dropout Complete N.D. -0.2 +0.3 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.0 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.2 -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.1 +0.3 -1.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 +0.1 +0.2 -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.2 +0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.0 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 +0.3 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 +0.1 +0.1
growth on ypd YPD N.D. -0.2 +0.3 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.0 -0.0 +0.6
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.4 +0.1 +0.2
growth on oleic acid YNB Glucose N.D. -0.2 +0.2 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.2 -0.1 +0.9
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