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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14071 and 14072 are separated by 1037 nucleotides
14072 and 14073 are separated by 634 nucleotides
14073 and 14074 overlap by 26 nucleotides
14074 and 14075 are separated by 3297 nucleotides
mRNA_5703: 14071 - KOG1289 Amino acid transporters, at 724,681 to 726,988
14071
mRNA_5704: 14072 - KOG2483 Upstream transcription factor 2/L-myc-2 protein, at 728,026 to 730,424
14072
mRNA_5705: 14073 - HMMPfam-Cysteine-rich secretory protein family-PF00188,SUPERFAMILY--SSF55797, at 731,059 to 731,970
14073
mRNA_5706: 14074 - Hypothetical Protein, at 731,945 to 733,165
14074
mRNA_5707: 14075 - Hypothetical Protein, at 736,463 to 742,238
14075
Group
Condition
mRNA
_5703
mRNA
_5704
mRNA
_5705
mRNA
_5706
mRNA
_5707
14071
14072
14073
14074
14075
auxotrophy
Dropout Complete
+0.1
-0.4
-0.7
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-1.0
+0.1
-0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.7
-0.9
+0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-1.3
+0.1
+0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-1.5
+0.0
+0.4
-0.2
auxotrophy
YNB Glucose
+0.4
-0.4
-0.3
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.2
-1.7
+0.0
+0.4
growth on oleic acid
YNB Oleic Acid
+0.1
-0.4
-0.0
-0.3
-0.2
growth on oleic acid
YNB Glucose
+0.1
-0.3
+0.0
-0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.1
-0.5
-0.3
-0.1
growth on ypd
YPD
-0.0
-0.4
-0.4
+0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
-0.9
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
-0.1
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.0
+0.3
-0.4
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.5
-0.6
+0.6
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.4
+0.1
+0.5
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.2
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.2
+0.5
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
+0.5
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.1
+1.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.8
+0.8
+0.4
+0.0
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