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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14081 and 14082 are separated by 76 nucleotides
14082 and 14083 are separated by 90 nucleotides
14083 and 14084 are separated by 501 nucleotides
14084 and 14085 are separated by 312 nucleotides
mRNA_5713: 14081 - K18819 GOLS inositol 3-alpha-galactosyltransferase, at 754,752 to 755,900
14081
mRNA_5714: 14082 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 755,977 to 757,736
14082
mRNA_5715: 14083 - BLAST Elongator complex protein 4 [Ceraceosorus bombacis], at 757,827 to 758,501
14083
mRNA_5716: 14084 - Hypothetical Protein, at 759,003 to 760,646
14084
mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760,959 to 763,265
14085
Group
Condition
mRNA
_5713
mRNA
_5714
mRNA
_5715
mRNA
_5716
mRNA
_5717
14081
14082
14083
14084
14085
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
N.D.
+0.1
+0.1
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
N.D.
+0.3
+0.3
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
N.D.
+0.2
+0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.0
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
+0.2
-0.3
-0.3
growth on ypd
YPD
-0.3
N.D.
+0.1
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
-0.3
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.8
N.D.
+0.7
+0.0
-0.1
growth on oleic acid
YNB Glucose
-0.5
N.D.
+0.4
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
+0.2
-0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
N.D.
+0.1
+0.1
-0.5
growth on ricinoleic acid
YNB Glucose
+0.4
N.D.
+0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
+0.2
+0.0
+0.2
auxotrophy
Dropout Complete
+0.6
N.D.
+0.5
+0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.7
+0.1
-0.2
auxotrophy
YNB Glucose
+0.6
N.D.
+0.5
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
N.D.
+0.7
+0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
N.D.
+0.4
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.3
N.D.
+0.3
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
N.D.
+0.5
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
N.D.
+0.6
+0.1
+0.4
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