Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14083 and 14084 are separated by 501 nucleotides14084 and 14085 are separated by 312 nucleotides14085 and 14086 are separated by 146 nucleotides14086 and 14087 are separated by 277 nucleotides mRNA_5715: 14083 - BLAST Elongator complex protein 4 [Ceraceosorus bombacis], at 757,827 to 758,501 14083 mRNA_5716: 14084 - Hypothetical Protein, at 759,003 to 760,646 14084 mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760,959 to 763,265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763,412 to 765,448 14086 mRNA_5719: 14087 - K00290 LYS1 saccharopine dehydrogenase (NAD+, L-lysine forming), at 765,726 to 767,088 14087
Group Condition mRNA_5715 mRNA_5716 mRNA_5717 mRNA_5718 mRNA_5719
14083 14084 14085 14086 14087
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 -0.5 -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 -1.3 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.1 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.3 -0.7 -0.9 N.D.
growth on ypd YPD +0.1 +0.1 -0.3 -0.6 N.D.
auxotrophy Dropout Complete +0.5 +0.1 -0.5 -0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 -0.1 -0.0 N.D.
auxotrophy YNB Glucose +0.5 -0.0 -0.2 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.3 -0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.7 +0.0 -0.3 -0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.1 -0.2 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.0 -0.2 +0.1 N.D.
growth on oleic acid YNB Glucose +0.4 +0.1 -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.1 +0.1 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.0 +0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 -0.2 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.2 +0.2 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.7 +0.0 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.1 +0.4 -0.1 N.D.
remove
mRNA_5715
plot
remove
mRNA_5716
plot
remove
mRNA_5717
remove
mRNA_5718
plot
remove
mRNA_5719
plot