Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14089 and 14090 are separated by 210 nucleotides14090 and 14091 are separated by 349 nucleotides14091 and 14092 are separated by 114 nucleotides14092 and 14093 are separated by 95 nucleotides mRNA_5721: 14089 - K19219 JMJD7 jumonji domain-containing protein 7, at 768,732 to 770,042 14089 mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770,253 to 773,842 14090 mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774,192 to 776,044 14091 mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776,159 to 779,515 14092 mRNA_5725: 14093 - K03234 EEF2 elongation factor 2, at 779,611 to 783,273 14093
Group Condition mRNA_5721 mRNA_5722 mRNA_5723 mRNA_5724 mRNA_5725
14089 14090 14091 14092 14093
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.4 -0.0 -0.5 -1.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.9 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 -0.2 +0.1 -0.3
auxotrophy Dropout Complete +0.2 -0.0 -0.2 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.1 +0.2 -0.2 -1.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.4 +0.0 +0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.0 +0.5 +0.2 -1.6
growth on oleic acid YNB Glucose +0.3 +0.4 -0.1 -0.2 -0.6
growth on oleic acid YNB Oleic Acid +0.4 +0.3 +0.7 -0.0 -1.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 -0.4 -0.4 +0.9
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.3 +0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.4 +0.1 +0.6 +0.1 -1.0
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.3 +0.0 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 +0.8 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 +0.4 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.1 +0.8 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.3 -0.2 -0.2 +1.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 +0.6 -0.2 +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 +0.1 -0.1 +1.5
auxotrophy YNB Glucose +0.5 +0.3 +0.5 -0.3 +0.5
growth on ypd YPD -0.0 +0.2 +1.3 +0.0 +0.5
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