Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14092 and 14093 are separated by 95 nucleotides14093 and 14094 are separated by 362 nucleotides14094 and 14095 are separated by 486 nucleotides14095 and 14096 are separated by 172 nucleotides mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776,159 to 779,515 14092 mRNA_5725: 14093 - K03234 EEF2 elongation factor 2, at 779,611 to 783,273 14093 mRNA_5726: 14094 - KOG2539 Mitochondrial/chloroplast ribosome small subunit component, at 783,636 to 785,944 14094 mRNA_5727: 14095 - HMMPfam-Elongation factor G C-terminus-PF00679,SUPERFAMILY--SSF54980, at 786,431 to 787,168 14095 mRNA_5728: 14096 - K03644 lipA lipoyl synthase, at 787,341 to 788,900 14096
Group Condition mRNA_5724 mRNA_5725 mRNA_5726 mRNA_5727 mRNA_5728
14092 14093 14094 14095 14096
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -1.4 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.0 -1.5 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -1.6 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -1.0 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.2 -0.6 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.4 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.3 +0.5 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.3 N.D. N.D. N.D.
growth on ypd YPD +0.0 +0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.9 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +1.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +1.7 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +1.5 N.D. N.D. N.D.
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