Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14097 and 14098 are separated by 218 nucleotides14098 and 14099 are separated by 4223 nucleotides14099 and 14100 are separated by 486 nucleotides14100 and 14101 overlap by 62 nucleotides mRNA_5729: 14097 - HMMPfam-MT-A70-PF05063,ProSiteProfiles-MT-A70-like family profile.-PS51143, at 789,135 to 790,820 14097 mRNA_5730: 14098 - SUPERFAMILY--SSF47113, at 791,039 to 793,394 14098 mRNA_5731: 14099 - Hypothetical Protein, at 797,618 to 798,076 14099 mRNA_5732: 14100 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 798,563 to 800,717 14100 mRNA_5733: 14101 - KOG4197 FOG PPR repeat, at 800,656 to 803,521 14101
Group Condition mRNA_5729 mRNA_5730 mRNA_5731 mRNA_5732 mRNA_5733
14097 14098 14099 14100 14101
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 +0.3 -2.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 -0.1 -1.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3 +0.2 -1.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.6 -0.1 -0.5 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 +0.0 -0.3 -0.3
auxotrophy YNB Glucose -0.3 -0.1 +0.4 -1.0 +0.3
auxotrophy Dropout Complete -0.3 +0.1 +0.2 -1.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.5 -0.1 -1.4 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 +0.4 -0.7 +0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.2 +0.1 -0.6 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.9 +0.2 -0.6 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.2 +0.4 -0.4 +0.2
growth on ricinoleic acid YNB Glucose -0.6 +0.7 +0.1 -0.8 +0.7
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 +0.2 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 +0.0 -0.1 -0.2
growth on oleic acid YNB Glucose +0.3 +0.1 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.4 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 +0.5 -0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.4 +0.1 -0.3 +0.5
growth on ypd YPD +0.1 +0.1 +0.3 +0.9 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +1.1 +0.4 +0.1 +1.2 -0.3
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