Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14098 and 14099 are separated by 4223 nucleotides14099 and 14100 are separated by 486 nucleotides14100 and 14101 overlap by 62 nucleotides14101 and 14102 are separated by 1653 nucleotides mRNA_5730: 14098 - SUPERFAMILY--SSF47113, at 791,039 to 793,394 14098 mRNA_5731: 14099 - Hypothetical Protein, at 797,618 to 798,076 14099 mRNA_5732: 14100 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 798,563 to 800,717 14100 mRNA_5733: 14101 - KOG4197 FOG PPR repeat, at 800,656 to 803,521 14101 mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805,175 to 807,034 14102
Group Condition mRNA_5730 mRNA_5731 mRNA_5732 mRNA_5733 mRNA_5734
14098 14099 14100 14101 14102
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.3 -2.7 -0.1 +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.6 -0.5 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -1.0 -0.3 +0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.1 -0.5 -0.5 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.2 -1.0 -0.0 +0.4
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.6 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 +0.0 -0.2 -0.3
growth on oleic acid YNB Glucose +0.1 -0.1 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.1 -0.3 +0.5 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.5 -0.3 +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 -0.1 -0.2 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.3 -0.3 +1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.1 -1.4 +0.3 +1.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.1 +1.2 -0.3 -0.8
auxotrophy Dropout Complete +0.1 +0.2 -1.0 +0.2 +1.2
growth on ricinoleic acid YNB Glucose +0.7 +0.1 -0.8 +0.7 +0.1
growth on ypd YPD +0.1 +0.3 +0.9 -0.1 -0.5
auxotrophy YNB Glucose -0.1 +0.4 -1.0 +0.3 +1.4
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.4 -0.7 +0.1 +1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.4 +0.1 -0.1 +0.7
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.4 -0.4 +0.2 +1.4
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