Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14101 and 14102 are separated by 1653 nucleotides14102 and 14103 are separated by 464 nucleotides14103 and 14104 are separated by 564 nucleotides14104 and 14105 are separated by 485 nucleotides mRNA_5733: 14101 - KOG4197 FOG PPR repeat, at 800,656 to 803,521 14101 mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805,175 to 807,034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807,499 to 811,509 14103 mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812,074 to 813,868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814,354 to 815,055 14105
Group Condition mRNA_5733 mRNA_5734 mRNA_5735 mRNA_5736 mRNA_5737
14101 14102 14103 14104 14105
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 N.D. N.D. -2.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.8 N.D. N.D. -1.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 N.D. N.D. -1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.5 N.D. N.D. -0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.6 N.D. N.D. -1.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 N.D. N.D. -0.2
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.7 N.D. N.D. -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +1.0 N.D. N.D. -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.7 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.7 N.D. N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 +1.0 N.D. N.D. -0.4
growth on ricinoleic acid YNB Glucose +0.7 +0.1 N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 +1.1 N.D. N.D. -0.8
auxotrophy Dropout Complete +0.2 +1.2 N.D. N.D. -0.9
auxotrophy YNB Glucose 75mM Methionine +0.2 +1.4 N.D. N.D. -0.7
auxotrophy YNB Glucose +0.3 +1.4 N.D. N.D. -0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.3 N.D. N.D. +1.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.5 N.D. N.D. +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.4 N.D. N.D. +0.8
growth on ypd YPD -0.1 -0.5 N.D. N.D. +2.1
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