Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14102 and 14103 are separated by 464 nucleotides14103 and 14104 are separated by 564 nucleotides14104 and 14105 are separated by 485 nucleotides14105 and 14106 are separated by 326 nucleotides mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805,175 to 807,034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807,499 to 811,509 14103 mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812,074 to 813,868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814,354 to 815,055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815,382 to 817,330 14106
Group Condition mRNA_5734 mRNA_5735 mRNA_5736 mRNA_5737 mRNA_5738
14102 14103 14104 14105 14106
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. N.D. -1.1 -1.7
growth on oleic acid YNB Oleic Acid -0.1 N.D. N.D. -1.7 -1.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. -2.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 N.D. N.D. -1.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 N.D. N.D. -1.6 -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.5 N.D. N.D. -0.8 -0.6
growth on oleic acid YNB Glucose +0.1 N.D. N.D. -0.6 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. N.D. -1.0 -1.0
auxotrophy Dropout Complete +1.2 N.D. N.D. -0.9 -1.4
growth on ricinoleic acid YNB Glucose +0.1 N.D. N.D. -0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine +1.1 N.D. N.D. -0.8 -0.9
auxotrophy YNB Glucose 75mM Methionine +1.4 N.D. N.D. -0.7 -1.3
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. -0.2 +0.1
auxotrophy YNB Glucose +1.4 N.D. N.D. -0.8 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 N.D. N.D. -0.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. N.D. -0.4 +0.2
growth on ypd YPD -0.5 N.D. N.D. +2.1 -1.0
ypd buoyancy 40 hrs Low Buoyancy +1.0 N.D. N.D. -0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. N.D. +0.7 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. N.D. +0.8 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. N.D. +1.0 +1.2
remove
mRNA_5734
plot		 remove
mRNA_5735
plot		 remove
mRNA_5736		 remove
mRNA_5737
plot		 remove
mRNA_5738
plot