Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14103 and 14104 are separated by 564 nucleotides14104 and 14105 are separated by 485 nucleotides14105 and 14106 are separated by 326 nucleotides14106 and 14107 are separated by 816 nucleotides mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807,499 to 811,509 14103 mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812,074 to 813,868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814,354 to 815,055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815,382 to 817,330 14106 mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488 14107
Group Condition mRNA_5735 mRNA_5736 mRNA_5737 mRNA_5738 mRNA_5739
14103 14104 14105 14106 14107
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.6 -1.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -1.7 -1.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -2.1 -0.8 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -1.1 -1.7 N.D.
auxotrophy Dropout Complete N.D. N.D. -0.9 -1.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.7 -1.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -1.0 -1.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.8 -0.9 N.D.
auxotrophy YNB Glucose N.D. N.D. -0.8 -0.8 N.D.
growth on oleic acid YNB Glucose N.D. N.D. -0.6 -0.9 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.8 -0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -1.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.4 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.4 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.7 +0.2 N.D.
growth on ypd YPD N.D. N.D. +2.1 -1.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.8 +0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +1.0 +1.2 N.D.
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