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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14106 and 14107 are separated by 816 nucleotides
14107 and 14108 are separated by 448 nucleotides
14108 and 14109 are separated by 1203 nucleotides
14109 and 14110 are separated by 1784 nucleotides
mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815,382 to 817,330
14106
mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488
14107
mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820,937 to 822,719
14108
mRNA_5741: 14109 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 823,923 to 825,708
14109
mRNA_5742: 14110 - BLAST spindle pole body protein [Moesziomyces antarcticus T..., at 827,493 to 828,317
14110
Group
Condition
mRNA
_5738
mRNA
_5739
mRNA
_5740
mRNA
_5741
mRNA
_5742
14106
14107
14108
14109
14110
auxotrophy
Dropout Complete
-1.4
N.D.
-0.1
N.D.
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-1.3
N.D.
-0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.9
N.D.
-0.4
N.D.
-0.3
auxotrophy
YNB Glucose
-0.8
N.D.
-0.2
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.7
N.D.
+0.2
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
-1.4
N.D.
+0.2
N.D.
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.5
N.D.
+0.3
N.D.
+0.5
growth on ypd
YPD
-1.0
N.D.
+0.2
N.D.
+0.1
growth on oleic acid
YNB Glucose
-0.9
N.D.
-0.1
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.0
N.D.
+0.3
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
N.D.
+0.2
N.D.
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.0
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
N.D.
+0.2
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
N.D.
+0.3
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.2
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+1.2
N.D.
-0.3
N.D.
-0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
-0.7
N.D.
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
N.D.
-0.0
N.D.
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
N.D.
+0.4
N.D.
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
N.D.
+0.3
N.D.
-0.1
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