Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14107 and 14108 are separated by 448 nucleotides
14108 and 14109 are separated by 1203 nucleotides
14109 and 14110 are separated by 1784 nucleotides
14110 and 14111 are separated by 224 nucleotides
mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488
14107
mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820,937 to 822,719
14108
mRNA_5741: 14109 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 823,923 to 825,708
14109
mRNA_5742: 14110 - BLAST spindle pole body protein [Moesziomyces antarcticus T..., at 827,493 to 828,317
14110
mRNA_5743: 14111 - K05672 ABCC12 ATP-binding cassette, subfamily C (CFTR/MRP), member 12, at 828,542 to 833,992
14111
Group
Condition
mRNA
_5739
mRNA
_5740
mRNA
_5741
mRNA
_5742
mRNA
_5743
14107
14108
14109
14110
14111
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
N.D.
-0.6
+0.2
auxotrophy
Dropout Complete
N.D.
-0.1
N.D.
-0.8
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
N.D.
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
N.D.
-0.5
-0.1
auxotrophy
YNB Glucose
N.D.
-0.2
N.D.
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
N.D.
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
N.D.
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
N.D.
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
N.D.
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
N.D.
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.7
N.D.
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
N.D.
+0.1
-0.3
growth on oleic acid
YNB Glucose
N.D.
-0.1
N.D.
+0.3
+0.1
growth on ypd
YPD
N.D.
+0.2
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
N.D.
+0.3
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
N.D.
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
N.D.
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
N.D.
+0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
N.D.
+0.5
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
N.D.
+0.3
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
N.D.
+0.7
+0.1
remove
mRNA_5739
plot
remove
mRNA_5740
plot
remove
mRNA_5741
remove
mRNA_5742
plot
remove
mRNA_5743
plot