Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14107 and 14108 are separated by 448 nucleotides14108 and 14109 are separated by 1203 nucleotides14109 and 14110 are separated by 1784 nucleotides14110 and 14111 are separated by 224 nucleotides mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488 14107 mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820,937 to 822,719 14108 mRNA_5741: 14109 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 823,923 to 825,708 14109 mRNA_5742: 14110 - BLAST spindle pole body protein [Moesziomyces antarcticus T..., at 827,493 to 828,317 14110 mRNA_5743: 14111 - K05672 ABCC12 ATP-binding cassette, subfamily C (CFTR/MRP), member 12, at 828,542 to 833,992 14111
Group Condition mRNA_5739 mRNA_5740 mRNA_5741 mRNA_5742 mRNA_5743
14107 14108 14109 14110 14111
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 N.D. -0.6 +0.2
auxotrophy Dropout Complete N.D. -0.1 N.D. -0.8 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 N.D. -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 N.D. -0.5 -0.1
auxotrophy YNB Glucose N.D. -0.2 N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 N.D. -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 N.D. -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 N.D. -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 N.D. +0.7 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 N.D. +0.1 -0.3
growth on oleic acid YNB Glucose N.D. -0.1 N.D. +0.3 +0.1
growth on ypd YPD N.D. +0.2 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 N.D. +0.3 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.3 N.D. +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 N.D. +0.3 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.2 N.D. +0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 N.D. +0.5 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 N.D. +0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. +0.7 +0.1
remove
mRNA_5739
plot
remove
mRNA_5740
plot
remove
mRNA_5741
remove
mRNA_5742
plot
remove
mRNA_5743
plot