Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14122 and 14123 are separated by 1627 nucleotides14123 and 14124 are separated by 353 nucleotides14124 and 14125 are separated by 162 nucleotides14125 and 14126 are separated by 284 nucleotides mRNA_5754: 14122 - KOG1721 FOG Zn-finger, at 864,214 to 867,057 14122 mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868,685 to 870,428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870,782 to 872,057 14124 mRNA_5757: 14125 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790,SUPERFAMILY--SSF51445, at 872,220 to 874,136 14125 mRNA_5758: 14126 - K00627 DLAT, aceF, pdhC pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase), at 874,421 to 875,943 14126
Group Condition mRNA_5754 mRNA_5755 mRNA_5756 mRNA_5757 mRNA_5758
14122 14123 14124 14125 14126
auxotrophy YNB Glucose -1.0 +0.3 -0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.8 +0.1 -0.6 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 +0.4 -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -1.3 +0.6 -0.2 -0.1 N.D.
auxotrophy Dropout Complete -0.3 +0.0 -0.4 +0.0 N.D.
growth on oleic acid YNB Glucose -0.8 +0.2 -0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.7 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.5 -0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.1 -0.4 +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 +0.4 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.3 -1.1 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.5 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 +0.1 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.8 +0.5 -0.8 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.1 +0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.4 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 +0.5 -0.3 N.D.
growth on ypd YPD -0.0 +0.3 +0.6 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.0 +1.2 +0.1 N.D.
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