Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14123 and 14124 are separated by 353 nucleotides14124 and 14125 are separated by 162 nucleotides14125 and 14126 are separated by 284 nucleotides14126 and 14127 are separated by 862 nucleotides mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868,685 to 870,428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870,782 to 872,057 14124 mRNA_5757: 14125 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790,SUPERFAMILY--SSF51445, at 872,220 to 874,136 14125 mRNA_5758: 14126 - K00627 DLAT, aceF, pdhC pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase), at 874,421 to 875,943 14126 mRNA_5759: 14127 - K14769 UTP11 U3 small nucleolar RNA-associated protein 11, at 876,806 to 878,161 14127
Group Condition mRNA_5755 mRNA_5756 mRNA_5757 mRNA_5758 mRNA_5759
14123 14124 14125 14126 14127
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.8 -0.4 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.7 +0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -1.1 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.5 -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.6 +0.0 N.D. N.D.
auxotrophy YNB Glucose +0.3 -0.6 -0.1 N.D. N.D.
auxotrophy Dropout Complete +0.0 -0.4 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.4 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.2 -0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 +0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.5 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.6 -0.2 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 -0.2 N.D. N.D.
growth on ypd YPD +0.3 +0.6 +0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +1.2 +0.1 N.D. N.D.
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