Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14136 and 14137 are separated by 2914 nucleotides14137 and 14138 are separated by 476 nucleotides14138 and 14139 are separated by 250 nucleotides14139 and 14140 are separated by 76 nucleotides mRNA_5768: 14136 - Hypothetical Protein, at 895,044 to 899,242 14136 mRNA_5769: 14137 - Hypothetical Protein, at 902,157 to 903,800 14137 mRNA_5770: 14138 - K15171 SUPT4H1, SPT4 transcription elongation factor SPT4, at 904,277 to 904,949 14138 mRNA_5771: 14139 - K00921 PIKFYVE, FAB1 1-phosphatidylinositol-3-phosphate 5-kinase, at 905,200 to 913,412 14139 mRNA_5772: 14140 - BLAST m serotype precursor [Moniliophthora roreri MCA 2..., at 913,489 to 916,106 14140
Group Condition mRNA_5768 mRNA_5769 mRNA_5770 mRNA_5771 mRNA_5772
14136 14137 14138 14139 14140
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.7 -1.6 -0.4 -0.7
growth on ypd YPD +0.1 -0.6 -0.3 -0.4 -0.6
auxotrophy Dropout Complete +0.2 -0.6 -0.7 +0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 -0.0 -0.4 -0.5
auxotrophy YNB Glucose +0.2 -0.7 +0.1 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.3 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.5 -0.4 -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.3 -0.1 -0.2 -0.1
growth on oleic acid YNB Glucose +0.1 +0.1 +0.3 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 +0.1 +0.4 +0.0
growth on oleic acid YNB Oleic Acid +0.3 +0.3 +0.0 +0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.5 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.3 +0.8 -0.5 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.5 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 +0.0 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.5 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.4 +0.0 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.8 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 +0.4 +0.3 +0.3
growth on ricinoleic acid YNB Glucose +0.3 +0.3 +0.7 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.5 +1.3 -0.1 +0.2
remove
mRNA_5768
plot
remove
mRNA_5769
plot
remove
mRNA_5770
remove
mRNA_5771
plot
remove
mRNA_5772
plot