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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14139 and 14140 are separated by 76 nucleotides
14140 and 14141 are separated by 577 nucleotides
14141 and 14142 are separated by 582 nucleotides
14142 and 14143 are separated by 292 nucleotides
mRNA_5771: 14139 - K00921 PIKFYVE, FAB1 1-phosphatidylinositol-3-phosphate 5-kinase, at 905,200 to 913,412
14139
mRNA_5772: 14140 - BLAST m serotype precursor [Moniliophthora roreri MCA 2..., at 913,489 to 916,106
14140
mRNA_5773: 14141 - Hypothetical Protein, at 916,684 to 917,418
14141
mRNA_5774: 14142 - K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126, at 918,001 to 918,584
14142
mRNA_5775: 14143 - Hypothetical Protein, at 918,877 to 919,776
14143
Group
Condition
mRNA
_5771
mRNA
_5772
mRNA
_5773
mRNA
_5774
mRNA
_5775
14139
14140
14141
14142
14143
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.7
-0.1
-0.2
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.5
-1.1
+0.5
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.1
-0.2
-0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
+0.3
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
-0.5
+0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.0
+0.2
-0.5
+0.2
growth on ypd
YPD
-0.4
-0.6
+0.6
+0.3
-0.1
growth on oleic acid
YNB Oleic Acid
+0.2
-0.4
-0.4
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.2
+0.2
+0.2
auxotrophy
Dropout Complete
+0.1
-0.6
-0.2
+0.8
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.9
+0.8
+0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.0
-0.0
+0.0
+0.2
auxotrophy
YNB Glucose
+0.1
+0.3
-0.2
-0.1
+0.3
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.1
+0.1
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.4
+0.2
+0.9
-0.5
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
-0.3
+0.3
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.0
-0.0
+0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
+0.3
+0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.3
-0.2
+0.2
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.3
+0.3
+0.0
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.6
+0.3
+0.5
+0.0
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