Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14144 and 14145 are separated by 185 nucleotides14145 and 14146 are separated by 566 nucleotides14146 and 14147 are separated by 473 nucleotides14147 and 14148 are separated by 306 nucleotides mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920,137 to 921,765 14144 mRNA_5777: 14145 - Hypothetical Protein, at 921,951 to 922,623 14145 mRNA_5778: 14146 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Transcription factor PAP1-PF08601,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF111430,SUPERFAMILY--SSF57959, at 923,190 to 924,639 14146 mRNA_5779: 14147 - K14848 RRB1, GRWD1 ribosome assembly protein RRB1, at 925,113 to 926,759 14147 mRNA_5780: 14148 - KOG2989 Uncharacterized conserved protein, at 927,066 to 928,208 14148
Group Condition mRNA_5776 mRNA_5777 mRNA_5778 mRNA_5779 mRNA_5780
14144 14145 14146 14147 14148
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 -1.5 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 -0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.3 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 -0.4 N.D. N.D.
growth on ypd YPD +0.2 -0.2 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.5 -0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.2 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.3 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.6 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.3 +0.2 N.D. N.D.
auxotrophy Dropout Complete -0.1 +0.4 +0.8 N.D. N.D.
growth on oleic acid YNB Glucose +0.4 +0.3 +0.4 N.D. N.D.
auxotrophy YNB Glucose +0.1 +0.5 +0.6 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 +0.7 N.D. N.D.
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