Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14145 and 14146 are separated by 566 nucleotides
14146 and 14147 are separated by 473 nucleotides
14147 and 14148 are separated by 306 nucleotides
14148 and 14149 are separated by 598 nucleotides
mRNA_5777: 14145 - Hypothetical Protein, at 921,951 to 922,623
14145
mRNA_5778: 14146 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Transcription factor PAP1-PF08601,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF111430,SUPERFAMILY--SSF57959, at 923,190 to 924,639
14146
mRNA_5779: 14147 - K14848 RRB1, GRWD1 ribosome assembly protein RRB1, at 925,113 to 926,759
14147
mRNA_5780: 14148 - KOG2989 Uncharacterized conserved protein, at 927,066 to 928,208
14148
mRNA_5781: 14149 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 928,807 to 930,630
14149
Group
Condition
mRNA
_5777
mRNA
_5778
mRNA
_5779
mRNA
_5780
mRNA
_5781
14145
14146
14147
14148
14149
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-1.5
N.D.
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
N.D.
N.D.
-0.2
growth on ypd
YPD
-0.2
-0.2
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.2
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
N.D.
N.D.
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.4
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
N.D.
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.1
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
N.D.
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
N.D.
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.3
+0.4
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.2
N.D.
N.D.
+0.3
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.4
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.6
+0.3
N.D.
N.D.
+0.3
auxotrophy
YNB Glucose
+0.5
+0.6
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.7
N.D.
N.D.
+0.3
auxotrophy
Dropout Complete
+0.4
+0.8
N.D.
N.D.
+0.2
remove
mRNA_5777
plot
remove
mRNA_5778
plot
remove
mRNA_5779
remove
mRNA_5780
plot
remove
mRNA_5781
plot