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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14147 and 14148 are separated by 306 nucleotides
14148 and 14149 are separated by 598 nucleotides
14149 and 14150 are separated by 613 nucleotides
14150 and 14151 are separated by 202 nucleotides
mRNA_5779: 14147 - K14848 RRB1, GRWD1 ribosome assembly protein RRB1, at 925,113 to 926,759
14147
mRNA_5780: 14148 - KOG2989 Uncharacterized conserved protein, at 927,066 to 928,208
14148
mRNA_5781: 14149 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 928,807 to 930,630
14149
mRNA_5782: 14150 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 931,244 to 933,171
14150
mRNA_5783: 14151 - KOG4623 Uncharacterized conserved protein, at 933,374 to 935,462
14151
Group
Condition
mRNA
_5779
mRNA
_5780
mRNA
_5781
mRNA
_5782
mRNA
_5783
14147
14148
14149
14150
14151
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.1
-1.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.2
-1.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.3
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.1
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.1
+0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.1
+0.1
-0.2
auxotrophy
YNB Glucose
N.D.
N.D.
+0.1
+0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.2
+0.1
+0.2
auxotrophy
Dropout Complete
N.D.
N.D.
+0.2
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.0
+0.3
-0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.0
+0.2
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.3
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.3
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.3
+0.1
-0.1
growth on ypd
YPD
N.D.
N.D.
-0.0
-0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.3
+0.5
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.4
-0.3
+1.0
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