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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14150 and 14151 are separated by 202 nucleotides
14151 and 14152 overlap by 2 nucleotides
14152 and 14153 are separated by 1172 nucleotides
14153 and 14154 are separated by 470 nucleotides
mRNA_5782: 14150 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 931,244 to 933,171
14150
mRNA_5783: 14151 - KOG4623 Uncharacterized conserved protein, at 933,374 to 935,462
14151
mRNA_5784: 14152 - Hypothetical Protein, at 935,461 to 936,039
14152
mRNA_5785: 14153 - K14758 HRR25 casein kinase I homolog HRR25, at 937,212 to 938,671
14153
mRNA_5786: 14154 - Hypothetical Protein, at 939,142 to 939,826
14154
Group
Condition
mRNA
_5782
mRNA
_5783
mRNA
_5784
mRNA
_5785
mRNA
_5786
14150
14151
14152
14153
14154
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.3
-0.2
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
+0.1
-0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.4
-0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
-0.5
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.2
-0.5
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.2
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
+0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
-0.5
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose
+0.0
-0.2
+0.1
N.D.
N.D.
growth on ypd
YPD
-0.1
+0.4
-0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+1.0
-0.5
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.0
+0.1
N.D.
N.D.
auxotrophy
Dropout Complete
+0.1
-0.2
+0.6
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
-0.3
+0.6
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.1
-0.0
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
+0.2
N.D.
N.D.
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