Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14151 and 14152 overlap by 2 nucleotides14152 and 14153 are separated by 1172 nucleotides14153 and 14154 are separated by 470 nucleotides14154 and 14155 are separated by 401 nucleotides mRNA_5783: 14151 - KOG4623 Uncharacterized conserved protein, at 933,374 to 935,462 14151 mRNA_5784: 14152 - Hypothetical Protein, at 935,461 to 936,039 14152 mRNA_5785: 14153 - K14758 HRR25 casein kinase I homolog HRR25, at 937,212 to 938,671 14153 mRNA_5786: 14154 - Hypothetical Protein, at 939,142 to 939,826 14154 mRNA_5787: 14155 - Hypothetical Protein, at 940,228 to 943,427 14155
Group Condition mRNA_5783 mRNA_5784 mRNA_5785 mRNA_5786 mRNA_5787
14151 14152 14153 14154 14155
growth on ricinoleic acid YNB Glucose -0.3 -0.5 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.5 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 N.D. N.D. +0.1
auxotrophy YNB Glucose -0.2 +0.1 N.D. N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.2 N.D. N.D. +0.2
growth on ypd YPD +0.4 -0.3 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.2 N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid -0.3 +0.6 N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.0 +0.1 N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 N.D. N.D. +0.2
auxotrophy Dropout Complete -0.2 +0.6 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.4 N.D. N.D. +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.5 N.D. N.D. +0.0
remove
mRNA_5783
plot
remove
mRNA_5784
plot
remove
mRNA_5785
remove
mRNA_5786
plot
remove
mRNA_5787
plot