Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14156 and 14157 are separated by 89 nucleotides14157 and 14158 are separated by 96 nucleotides14158 and 14159 are separated by 552 nucleotides14159 and 14160 are separated by 256 nucleotides mRNA_5788: 14156 - HMMPfam-Ribosome biogenesis protein SLX9-PF15341, at 943,585 to 944,558 14156 mRNA_5789: 14157 - KOG2859 DNA repair protein, member of the recA/RAD51 family, at 944,648 to 945,829 14157 mRNA_5790: 14158 - K01054 MGLL acylglycerol lipase, at 945,926 to 947,446 14158 mRNA_5791: 14159 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 947,999 to 949,301 14159 mRNA_5792: 14160 - K10755 RFC2_4 replication factor C subunit 2/4, at 949,558 to 951,302 14160
Group Condition mRNA_5788 mRNA_5789 mRNA_5790 mRNA_5791 mRNA_5792
14156 14157 14158 14159 14160
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 +0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.0 N.D. N.D.
growth on ypd YPD N.D. -0.0 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -0.1 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.4 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 +0.0 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.6 +0.0 N.D. N.D.
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