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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14158 and 14159 are separated by 552 nucleotides
14159 and 14160 are separated by 256 nucleotides
14160 and 14161 are separated by 174 nucleotides
14161 and 14162 are separated by 364 nucleotides
mRNA_5790: 14158 - K01054 MGLL acylglycerol lipase, at 945,926 to 947,446
14158
mRNA_5791: 14159 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 947,999 to 949,301
14159
mRNA_5792: 14160 - K10755 RFC2_4 replication factor C subunit 2/4, at 949,558 to 951,302
14160
mRNA_5793: 14161 - K10581 UBE2O ubiquitin-conjugating enzyme E2 O, at 951,477 to 955,108
14161
mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955,473 to 957,559
14162
Group
Condition
mRNA
_5790
mRNA
_5791
mRNA
_5792
mRNA
_5793
mRNA
_5794
14158
14159
14160
14161
14162
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
N.D.
+0.2
-1.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
N.D.
-0.1
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
N.D.
N.D.
+0.1
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
N.D.
+0.0
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
N.D.
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
+0.1
-0.4
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
N.D.
+0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
N.D.
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
N.D.
+0.0
-0.1
growth on oleic acid
YNB Glucose
-0.1
N.D.
N.D.
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
N.D.
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
N.D.
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
N.D.
+0.1
+0.2
growth on ypd
YPD
+0.2
N.D.
N.D.
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
N.D.
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose
+0.0
N.D.
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
N.D.
+0.1
+0.3
auxotrophy
Dropout Complete
-0.0
N.D.
N.D.
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
N.D.
+0.1
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
N.D.
+0.2
+0.9
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