Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14159 and 14160 are separated by 256 nucleotides14160 and 14161 are separated by 174 nucleotides14161 and 14162 are separated by 364 nucleotides14162 and 14163 are separated by 295 nucleotides mRNA_5791: 14159 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 947,999 to 949,301 14159 mRNA_5792: 14160 - K10755 RFC2_4 replication factor C subunit 2/4, at 949,558 to 951,302 14160 mRNA_5793: 14161 - K10581 UBE2O ubiquitin-conjugating enzyme E2 O, at 951,477 to 955,108 14161 mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955,473 to 957,559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957,855 to 959,394 14163
Group Condition mRNA_5791 mRNA_5792 mRNA_5793 mRNA_5794 mRNA_5795
14159 14160 14161 14162 14163
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 -1.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 -0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.2 -1.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -0.4 -0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.3 -0.6 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.1 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.0 -0.3 +0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.2 -0.1 -0.2
auxotrophy YNB Glucose N.D. N.D. +0.1 +0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.0 -0.6 +0.5
auxotrophy Dropout Complete N.D. N.D. +0.2 +0.3 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.1 +0.1 -0.0
growth on ypd YPD N.D. N.D. +0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 +0.4 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.2 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2 +0.9 +0.0
remove
mRNA_5791
plot
remove
mRNA_5792
plot
remove
mRNA_5793
remove
mRNA_5794
plot
remove
mRNA_5795
plot