Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14161 and 14162 are separated by 364 nucleotides14162 and 14163 are separated by 295 nucleotides14163 and 14164 overlap by 20 nucleotides14164 and 14165 are separated by 1613 nucleotides mRNA_5793: 14161 - K10581 UBE2O ubiquitin-conjugating enzyme E2 O, at 951,477 to 955,108 14161 mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955,473 to 957,559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957,855 to 959,394 14163 mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959,375 to 960,569 14164 mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962,183 to 965,371 14165
Group Condition mRNA_5793 mRNA_5794 mRNA_5795 mRNA_5796 mRNA_5797
14161 14162 14163 14164 14165
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.7 -0.4 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.0 -0.4 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.6 -0.0 -0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 -0.3 -0.4 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 +0.2 -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.3 +0.1 -0.1 -0.1
auxotrophy Dropout Complete +0.2 +0.3 -0.5 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -1.1 -0.0 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.1 -0.1 -0.2
growth on oleic acid YNB Glucose +0.2 -0.1 -0.2 -0.1 +0.2
auxotrophy YNB Glucose +0.1 +0.3 -0.5 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.0 -0.0 -0.1
growth on ypd YPD +0.1 -0.1 +0.2 +0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 -0.3 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 -0.2 +0.0 +0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 -0.2 +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.6 +0.5 +0.3 +0.4
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.1 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.3 +0.2 +0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.9 +0.0 -0.4 +0.5
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